WIFA-Seq | Identification of cancer-driver genes in focal genomic alterations from whole genome sequencing data |
---|---|
|
|
News |
2018/02/26: Source codes are updated.
|
Introduction |
It integrates whole genome sequencing data sets from multiple cancer
samples and identify recurrent aberrations across multiple samples. The use of the wavelet analysis, being a multi-resolution approach, makes it possible
to effectively identify focal genomic aberrations in the broadly aberrant regions. |
Paper | Jang, H. Hur, Y. and Lee, H. (2016) Identification of cancer-driver genes in focal genomic aberrations from whole exome sequencing data. Scientific Reports |
Source codes |
Source codes are available here. There are Ensembl gene annotation files for GRCh37 and GRCh38. Please refer to the manaul pdf file. |
Contacts |
hyunjulee at gist.ac.kr |